An AI operating system
for single-cell biology
Gardener helps you retrieve public datasets, connect to your own HPC environment, and run rigorous dry-lab pipelines — with every command, parameter, and result tracked. Your raw data never leaves your machine.
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ACL 2026Gardener: An Agentic AI System for Single-Cell RNA Sequence AnalysisJunhan Liu, Zhenke Liu, Yongcheng Shi, Peilin Yu, Minxing Zhang, Jiapeng ZhangRead the paper →Setup guideInstall Gardener and connect your computemacOS and Windows install, your first project, and connecting a Slurm cluster, an SSH server, or a SPHERE testbed node.Open the guide →