Analysis

Configure a Pipeline and Run

01 / RUN

Run an Analysis

Once the app is installed and your data is imported (see the setup guide), running an analysis takes a few clicks. Every command, parameter, and result is tracked, so you can revisit or compare runs later.

  1. Select the dataset.
  2. Pick an analysis and fill in the form.
  3. Choose Run Analysis for a single step, or Run Pipeline for the whole workflow.
Analysis configuration form with the Run Analysis button
Analysis form and Run button

No LLM API key is required for this path.

02 / DEMOS

See the Pipelines Run

Five demos, one per assay. The intro covers a full single-cell RNA-seq run, then bulk RNA-seq, ATAC-seq, ChIP-seq, and whole-genome sequencing end to end.

Intro, Setup & Single-Cell RNA-seqIntro, setup, and a full single-cell RNA-seq runWatch on YouTube ↗
Bulk RNA-seqWatch on YouTube ↗
ATAC-seqWatch on YouTube ↗
ChIP-seqWatch on YouTube ↗
Whole-Genome SequencingWatch on YouTube ↗